Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCL13Q99616 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCL13Q99616 FAM86MP-201ENST00000340703 885 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCL13Q99616 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL13Q99616 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL13Q99616 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL13Q99616 POM121L10P-201ENST00000436994 1285 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 FAM58BP-201ENST00000439056 645 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 AL645933.1-201ENST00000440087 609 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 AC108725.1-201ENST00000495472 409 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL13Q99616 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL13Q99616 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.21□□□□□ -0.45
CCL13Q99616 RBM8B-201ENST00000555532 525 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 AC027237.1-201ENST00000560942 655 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.21□□□□□ -0.45
CCL13Q99616 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 MIR4538-201ENST00000581377 78 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 AL118558.3-201ENST00000607414 1079 ntBASIC12.21□□□□□ -0.45
CCL13Q99616 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL13Q99616 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL13Q99616 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL13Q99616 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CCL13Q99616 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL13Q99616 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL13Q99616 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
CCL13Q99616 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CCL13Q99616 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL13Q99616 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCL13Q99616 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCL13Q99616 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CCL13Q99616 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.21□□□□□ -0.46
CCL13Q99616 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
CCL13Q99616 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.21□□□□□ -0.46
CCL13Q99616 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CCL13Q99616 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
CCL13Q99616 AC026748.1-201ENST00000624349 3251 ntBASIC12.21□□□□□ -0.46
CCL13Q99616 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 AC012617.1-204ENST00000586340 2305 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCL13Q99616 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL13Q99616 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 TUBB8P8-201ENST00000458717 1058 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 AC092658.1-201ENST00000505836 891 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.2□□□□□ -0.46
CCL13Q99616 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL13Q99616 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL13Q99616 AC008805.1-201ENST00000590892 364 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 MIR6074-201ENST00000612054 107 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 AL023803.2-201ENST00000620080 638 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 Z98259.2-201ENST00000641583 609 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CCL13Q99616 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms