Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15□□□□□ -0.01
RPRD1AQ96P16 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 AC015802.1-201ENST00000588104 1449 ntBASIC15□□□□□ -0.01
RPRD1AQ96P16 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RPRD1AQ96P16 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RPRD1AQ96P16 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.99□□□□□ -0.01
RPRD1AQ96P16 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AC078875.1-201ENST00000431907 724 ntBASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AC125604.1-201ENST00000496255 707 ntBASIC14.99□□□□□ -0.01
RPRD1AQ96P16 RCC2P8-201ENST00000502779 1035 ntBASIC14.99□□□□□ -0.01
RPRD1AQ96P16 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 NDUFV2P1-201ENST00000596415 907 ntBASIC14.99□□□□□ -0.01
RPRD1AQ96P16 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RPRD1AQ96P16 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 RN7SL832P-201ENST00000607781 1756 ntBASIC14.98□□□□□ -0.01
RPRD1AQ96P16 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AC018629.1-201ENST00000623381 1736 ntBASIC14.98□□□□□ -0.01
RPRD1AQ96P16 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 HIST2H2BC-201ENST00000498492 580 ntBASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AL645939.5-201ENST00000606834 243 ntBASIC14.98□□□□□ -0.01
RPRD1AQ96P16 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AC092299.1-201ENST00000632679 757 ntBASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AL805961.1-203ENST00000641078 1258 ntBASIC14.98□□□□□ -0.01
RPRD1AQ96P16 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 AC005912.2-201ENST00000619492 2400 ntBASIC14.98□□□□□ -0.01
RPRD1AQ96P16 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RPRD1AQ96P16 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms