Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 AC104961.1-201ENST00000427605 771 ntBASIC15.65■□□□□ 0.1
LRCH3Q96II8 RBPMSLP-201ENST00000433427 502 ntBASIC15.65■□□□□ 0.1
LRCH3Q96II8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 AP000920.1-201ENST00000531824 344 ntBASIC15.65■□□□□ 0.1
LRCH3Q96II8 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 AC078814.4-201ENST00000546650 327 ntBASIC15.65■□□□□ 0.1
LRCH3Q96II8 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LRCH3Q96II8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 AL137783.1-201ENST00000623494 1896 ntBASIC15.65■□□□□ 0.1
LRCH3Q96II8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRCH3Q96II8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
LRCH3Q96II8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 FUCA1P1-201ENST00000374476 1351 ntBASIC15.64■□□□□ 0.09
LRCH3Q96II8 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 PYY2-201ENST00000315776 282 ntBASIC15.64■□□□□ 0.09
LRCH3Q96II8 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AL512599.1-201ENST00000430724 685 ntBASIC15.64■□□□□ 0.09
LRCH3Q96II8 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AC018638.5-201ENST00000450885 754 ntBASIC15.64■□□□□ 0.09
LRCH3Q96II8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRCH3Q96II8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.64■□□□□ 0.09
LRCH3Q96II8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 WASH3P-207ENST00000560956 1394 ntBASIC15.63■□□□□ 0.09
LRCH3Q96II8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LRCH3Q96II8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LRCH3Q96II8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms