Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 AC010327.5-201ENST00000586923 3061 ntBASIC15.42■□□□□ 0.06
TRIM11Q96F44 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 KRT17P7-201ENST00000451704 1104 ntBASIC15.41■□□□□ 0.06
TRIM11Q96F44 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 AP000812.2-201ENST00000538934 718 ntBASIC15.41■□□□□ 0.06
TRIM11Q96F44 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.41■□□□□ 0.06
TRIM11Q96F44 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM11Q96F44 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM11Q96F44 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 BOLA2P3-201ENST00000404566 256 ntBASIC15.4■□□□□ 0.06
TRIM11Q96F44 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 NME2P1-201ENST00000426182 414 ntBASIC15.4■□□□□ 0.06
TRIM11Q96F44 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 AC079316.1-201ENST00000548397 411 ntBASIC15.4■□□□□ 0.06
TRIM11Q96F44 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 MIR3197-201ENST00000582241 73 ntBASIC15.4■□□□□ 0.06
TRIM11Q96F44 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRIM11Q96F44 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM11Q96F44 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
TRIM11Q96F44 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.39■□□□□ 0.05
TRIM11Q96F44 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRIM11Q96F44 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms