Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
FOXRED1Q96CU9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CICP16-201ENST00000502609 2813 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 SLC7A15P-201ENST00000424028 1363 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AL138725.1-201ENST00000407347 1314 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 RNU1-114P-201ENST00000365297 166 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 KLF2P2-201ENST00000416807 1039 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AC104596.2-201ENST00000512793 793 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AP001582.1-201ENST00000525856 295 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 SORD2P-201ENST00000558556 1069 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AC103988.2-201ENST00000561804 725 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 SPDYE22P-201ENST00000582158 798 ntBASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
FOXRED1Q96CU9 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
FOXRED1Q96CU9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms