Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
CHCHD1Q96BP2 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CHCHD1Q96BP2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.6□□□□□ -0.71
CHCHD1Q96BP2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
CHCHD1Q96BP2 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 USP17L6P-201ENST00000382470 1197 ntBASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 RARRES2P8-201ENST00000566335 367 ntBASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 AC010507.1-201ENST00000633895 436 ntBASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 AC133561.5-201ENST00000635547 218 ntBASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 AC022497.1-201ENST00000624916 3691 ntBASIC10.59□□□□□ -0.71
CHCHD1Q96BP2 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.71
CHCHD1Q96BP2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
CHCHD1Q96BP2 MRPL37P1-201ENST00000592451 1337 ntBASIC10.58□□□□□ -0.71
CHCHD1Q96BP2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 AL121723.1-201ENST00000445194 1519 ntBASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 SHC1P1-201ENST00000425230 1745 ntBASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 AC022364.1-202ENST00000617468 2409 ntBASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 PCDHB17P-202ENST00000623466 3066 ntBASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 AC002056.1-201ENST00000395613 760 ntBASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.58□□□□□ -0.72
CHCHD1Q96BP2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms