Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AL161932.2-201ENST00000435436 679 ntBASIC17.72■□□□□ 0.43
RPGRQ92834 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.72■□□□□ 0.43
RPGRQ92834 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.72■□□□□ 0.43
RPGRQ92834 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 PGAM1P12-201ENST00000505622 748 ntBASIC17.72■□□□□ 0.43
RPGRQ92834 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
RPGRQ92834 AC145285.5-201ENST00000562217 361 ntBASIC17.72■□□□□ 0.43
RPGRQ92834 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.72■□□□□ 0.43
RPGRQ92834 AC244250.3-201ENST00000620749 366 ntBASIC17.72■□□□□ 0.43
RPGRQ92834 PCDHA3-202ENST00000532566 4594 ntBASIC17.72■□□□□ 0.43
RPGRQ92834 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RPGRQ92834 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.72■□□□□ 0.43
RPGRQ92834 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.72■□□□□ 0.43
RPGRQ92834 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RPGRQ92834 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.72■□□□□ 0.43
RPGRQ92834 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.71■□□□□ 0.43
RPGRQ92834 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RPGRQ92834 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RPGRQ92834 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.71■□□□□ 0.43
RPGRQ92834 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.71■□□□□ 0.43
RPGRQ92834 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RPGRQ92834 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RPGRQ92834 ACTG1P19-201ENST00000418987 1116 ntBASIC17.71■□□□□ 0.43
RPGRQ92834 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.71■□□□□ 0.43
RPGRQ92834 AQP7P5-201ENST00000428759 1049 ntBASIC17.71■□□□□ 0.43
RPGRQ92834 AQP7P4-201ENST00000447083 1042 ntBASIC17.71■□□□□ 0.43
RPGRQ92834 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 AQP7P2-201ENST00000453967 1041 ntBASIC17.71■□□□□ 0.43
RPGRQ92834 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.71■□□□□ 0.43
RPGRQ92834 RN7SL767P-201ENST00000493013 295 ntBASIC17.71■□□□□ 0.43
RPGRQ92834 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.71■□□□□ 0.43
RPGRQ92834 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
RPGRQ92834 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.71■□□□□ 0.43
RPGRQ92834 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.71■□□□□ 0.43
RPGRQ92834 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.71■□□□□ 0.43
RPGRQ92834 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.71■□□□□ 0.43
RPGRQ92834 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 AQP7P3-201ENST00000624547 1041 ntBASIC17.71■□□□□ 0.43
RPGRQ92834 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RPGRQ92834 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.71■□□□□ 0.43
RPGRQ92834 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.71■□□□□ 0.43
RPGRQ92834 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.71■□□□□ 0.43
RPGRQ92834 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPGRQ92834 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RPGRQ92834 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPGRQ92834 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPGRQ92834 CCT8L1P-201ENST00000465400 1674 ntBASIC17.71■□□□□ 0.42
RPGRQ92834 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.71■□□□□ 0.42
RPGRQ92834 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPGRQ92834 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPGRQ92834 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.7■□□□□ 0.42
RPGRQ92834 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.7■□□□□ 0.42
RPGRQ92834 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.7■□□□□ 0.42
RPGRQ92834 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPGRQ92834 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
RPGRQ92834 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RPGRQ92834 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPGRQ92834 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RPGRQ92834 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.7■□□□□ 0.42
RPGRQ92834 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.7■□□□□ 0.42
RPGRQ92834 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPGRQ92834 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms