Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 FLJ16779-201ENST00000612722 7638 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 AC026320.2-201ENST00000434379 478 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 NOC2LP1-201ENST00000450578 752 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 LDHBP1-201ENST00000455730 1119 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 AC008267.1-201ENST00000474858 1069 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 AC008723.1-201ENST00000506922 207 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 IQSEC3P1-201ENST00000538799 536 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 MIR6769A-201ENST00000617340 73 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 MIR7845-201ENST00000618396 99 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AC253536.4-201ENST00000440539 267 ntBASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 MIR3677-201ENST00000578964 60 ntBASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 RN7SL555P-201ENST00000584742 339 ntBASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AC051619.9-201ENST00000623237 597 ntBASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 AL928921.2-201ENST00000641325 2442 ntBASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SHKBP1Q8TBC3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms