Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 COX5BP1-201ENST00000507622 393 ntBASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AC078819.1-201ENST00000547454 765 ntBASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AC012085.1-201ENST00000548270 765 ntBASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AC073413.1-201ENST00000603927 732 ntBASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AC138951.2-201ENST00000623455 1161 ntBASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 AC064801.2-201ENST00000625052 1303 ntBASIC13.39□□□□□ -0.27
LSMEM1Q8N8F7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 COX5BP8-201ENST00000416911 349 ntBASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 TMEM14DP-201ENST00000422205 345 ntBASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 MIR3197-201ENST00000582241 73 ntBASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 ZACNP1-201ENST00000612259 710 ntBASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 AC244669.2-201ENST00000612320 853 ntBASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 IGHV3-72-202ENST00000621503 303 ntBASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LSMEM1Q8N8F7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms