Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 BMF-206ENST00000558774 671 ntTSL 3 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 RN7SL605P-201ENST00000577229 281 ntBASIC17.84■□□□□ 0.45
COL23A1Q86Y22 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 AL353622.2-201ENST00000605846 425 ntBASIC17.84■□□□□ 0.45
COL23A1Q86Y22 CSTP2-201ENST00000610599 398 ntBASIC17.84■□□□□ 0.45
COL23A1Q86Y22 AC020904.3-201ENST00000624199 442 ntBASIC17.84■□□□□ 0.45
COL23A1Q86Y22 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
COL23A1Q86Y22 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
COL23A1Q86Y22 TBC1D27-202ENST00000424239 1573 ntBASIC17.83■□□□□ 0.45
COL23A1Q86Y22 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.83■□□□□ 0.45
COL23A1Q86Y22 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.83■□□□□ 0.45
COL23A1Q86Y22 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC17.83■□□□□ 0.45
COL23A1Q86Y22 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
COL23A1Q86Y22 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COL23A1Q86Y22 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 RN7SL351P-201ENST00000469306 248 ntBASIC17.83■□□□□ 0.44
COL23A1Q86Y22 AC147876.1-201ENST00000504408 322 ntBASIC17.83■□□□□ 0.44
COL23A1Q86Y22 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 SORD2P-201ENST00000558556 1069 ntBASIC17.83■□□□□ 0.44
COL23A1Q86Y22 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 MIR6125-201ENST00000618986 96 ntBASIC17.83■□□□□ 0.44
COL23A1Q86Y22 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
COL23A1Q86Y22 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.82■□□□□ 0.44
COL23A1Q86Y22 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 OR2W2P-201ENST00000406313 909 ntBASIC17.82■□□□□ 0.44
COL23A1Q86Y22 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 FAM197Y6-201ENST00000420524 766 ntBASIC17.82■□□□□ 0.44
COL23A1Q86Y22 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.82■□□□□ 0.44
COL23A1Q86Y22 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms