Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
ZNF546Q86UE3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ZNF546Q86UE3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
ZNF546Q86UE3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
ZNF546Q86UE3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.15□□□□□ -0.47
ZNF546Q86UE3 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
ZNF546Q86UE3 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 AL645937.6-201ENST00000641122 3727 ntBASIC12.14□□□□□ -0.47
ZNF546Q86UE3 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 SPCS2P4-201ENST00000436160 681 ntBASIC12.14□□□□□ -0.47
ZNF546Q86UE3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 BX324167.2-201ENST00000623717 3316 ntBASIC12.14□□□□□ -0.47
ZNF546Q86UE3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.14□□□□□ -0.47
ZNF546Q86UE3 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 MAPK10-262ENST00000641051 5738 ntBASIC12.13□□□□□ -0.47
ZNF546Q86UE3 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.13□□□□□ -0.47
ZNF546Q86UE3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms