Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OTOP1Q7RTM1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
OTOP1Q7RTM1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OTOP1Q7RTM1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
OTOP1Q7RTM1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.66■□□□□ 0.26
OTOP1Q7RTM1 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.66■□□□□ 0.26
OTOP1Q7RTM1 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
OTOP1Q7RTM1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 ACTG1P19-201ENST00000418987 1116 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 OR51A9P-201ENST00000422578 911 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AC023141.7-201ENST00000430646 407 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AC063952.3-201ENST00000467756 308 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AC026470.1-201ENST00000478038 846 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AC106047.2-201ENST00000511723 743 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 MIR6746-201ENST00000620971 63 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AC233280.19-201ENST00000633223 136 ntBASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
OTOP1Q7RTM1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
OTOP1Q7RTM1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 AC004522.1-201ENST00000419978 654 ntBASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 AC093826.1-201ENST00000508655 993 ntBASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 TREHP1-201ENST00000531328 465 ntBASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 TSPY26P-202ENST00000565928 3884 ntBASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.64■□□□□ 0.25
OTOP1Q7RTM1 AL354702.1-201ENST00000442006 1960 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms