Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC149Q6ZUS6 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AGAP7P-201ENST00000582299 2062 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AGAP14-201ENST00000624701 2060 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 MRPL22P1-201ENST00000505398 616 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 TMCO5B-205ENST00000530020 894 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 MIR3180-2-201ENST00000581748 88 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 RN7SL470P-201ENST00000583069 259 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AC090386.2-201ENST00000623010 1039 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AP001184.1-201ENST00000637936 376 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AP002353.1-201ENST00000528257 1599 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 AC090502.4-201ENST00000551714 1386 ntBASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC149Q6ZUS6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 RN7SL277P-201ENST00000481521 288 ntBASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 AC141586.1-203ENST00000567242 366 ntBASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 AC084781.1-201ENST00000613737 656 ntBASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC149Q6ZUS6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms