Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 AC140479.7-201ENST00000636301 2332 ntBASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.35□□□□□ -0.27
PRAMEF20Q5VT98 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 MIR769-201ENST00000390225 118 ntBASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 ACTG1P2-201ENST00000415776 1125 ntBASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 ACTG1P11-201ENST00000425411 1125 ntBASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AL132994.2-201ENST00000603120 687 ntBASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AP000346.4-201ENST00000614827 381 ntBASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AP001267.2-201ENST00000532619 2086 ntBASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 TUBBP5-203ENST00000508529 1334 ntBASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PRAMEF20Q5VT98 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 LINC00552-201ENST00000625151 2579 ntBASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
PRAMEF20Q5VT98 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PRAMEF20Q5VT98 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms