Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 PHF23-213ENST00000613632 850 ntTSL 5 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 AL137077.2-201ENST00000635124 1608 ntBASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 AC097359.2-201ENST00000604992 2389 ntBASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC9.39□□□□□ -0.91
VPS13DQ5THJ4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 GGTLC4P-201ENST00000402176 664 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 RPL18AP16-201ENST00000424057 531 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 HNRNPA1P16-201ENST00000575692 955 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 CICP16-201ENST00000502609 2813 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 OR51A9P-201ENST00000422578 911 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 HNRNPA1P25-201ENST00000422644 937 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 TYMSP2-201ENST00000589501 424 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 IFNL3P1-201ENST00000595082 501 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PSME2-217ENST00000615264 874 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PSME2-218ENST00000630027 185 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 RN7SL832P-201ENST00000607781 1756 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AL139158.3-201ENST00000641212 1562 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC126177.1-201ENST00000547829 2218 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 GOLGA2P8-201ENST00000505201 779 ntBASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VPS13DQ5THJ4 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms