Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TSR1Q2NL82 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 TSSK5P-201ENST00000423978 907 ntBASIC16.1■□□□□ 0.17
TSR1Q2NL82 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.1■□□□□ 0.17
TSR1Q2NL82 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TSR1Q2NL82 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TSR1Q2NL82 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AC004899.2-201ENST00000622993 3860 ntBASIC16.09■□□□□ 0.17
TSR1Q2NL82 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 PSAT1P2-201ENST00000426107 972 ntBASIC16.09■□□□□ 0.17
TSR1Q2NL82 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 SPDYE18-201ENST00000510091 1050 ntBASIC16.09■□□□□ 0.17
TSR1Q2NL82 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AC120045.2-201ENST00000567334 178 ntBASIC16.09■□□□□ 0.17
TSR1Q2NL82 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AL390754.1-201ENST00000619088 582 ntBASIC16.09■□□□□ 0.17
TSR1Q2NL82 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.09■□□□□ 0.17
TSR1Q2NL82 INTS4P2-202ENST00000614726 2019 ntBASIC16.09■□□□□ 0.17
TSR1Q2NL82 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TSR1Q2NL82 AC003102.2-201ENST00000589195 1469 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms