Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 AC107373.2-201ENST00000607735 490 ntBASIC13.86□□□□□ -0.19
CHRNB3Q05901 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.86□□□□□ -0.19
CHRNB3Q05901 AL158212.4-201ENST00000624062 1286 ntBASIC13.86□□□□□ -0.19
CHRNB3Q05901 AC105233.6-201ENST00000642093 218 ntBASIC13.86□□□□□ -0.19
CHRNB3Q05901 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 MRPL37P1-201ENST00000592451 1337 ntBASIC13.86□□□□□ -0.19
CHRNB3Q05901 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 AC114271.1-201ENST00000612689 2813 ntBASIC13.86□□□□□ -0.19
CHRNB3Q05901 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRNB3Q05901 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHRNB3Q05901 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 AGAP10P-201ENST00000454844 2418 ntBASIC13.85□□□□□ -0.19
CHRNB3Q05901 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 AC068760.1-201ENST00000493579 1953 ntBASIC13.85□□□□□ -0.19
CHRNB3Q05901 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 SERBP1P5-201ENST00000510079 1181 ntBASIC13.85□□□□□ -0.19
CHRNB3Q05901 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 AC044860.1-202ENST00000559481 777 ntBASIC13.85□□□□□ -0.19
CHRNB3Q05901 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.85□□□□□ -0.19
CHRNB3Q05901 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHRNB3Q05901 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms