Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.84■□□□□ 0.93
ATP7AQ04656 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
ATP7AQ04656 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP7AQ04656 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP7AQ04656 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP7AQ04656 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP7AQ04656 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP7AQ04656 SRP14-208ENST00000560773 468 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP7AQ04656 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP7AQ04656 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP7AQ04656 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ATP7AQ04656 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP7AQ04656 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC20.83■□□□□ 0.93
ATP7AQ04656 Z98885.3-201ENST00000624882 1757 ntBASIC20.83■□□□□ 0.93
ATP7AQ04656 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP7AQ04656 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP7AQ04656 DDC-204ENST00000426377 1700 ntTSL 3 BASIC20.83■□□□□ 0.93
ATP7AQ04656 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP7AQ04656 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP7AQ04656 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP7AQ04656 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP7AQ04656 AL590824.1-201ENST00000403828 1349 ntBASIC20.83■□□□□ 0.92
ATP7AQ04656 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP7AQ04656 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP7AQ04656 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
ATP7AQ04656 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
ATP7AQ04656 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ATP7AQ04656 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP7AQ04656 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP7AQ04656 RPL18AP16-201ENST00000424057 531 ntBASIC20.83■□□□□ 0.92
ATP7AQ04656 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP7AQ04656 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC20.83■□□□□ 0.92
ATP7AQ04656 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC20.83■□□□□ 0.92
ATP7AQ04656 AC091304.3-201ENST00000566500 716 ntBASIC20.83■□□□□ 0.92
ATP7AQ04656 MIR4254-201ENST00000581063 76 ntBASIC20.83■□□□□ 0.92
ATP7AQ04656 AC080013.5-201ENST00000607044 679 ntBASIC20.83■□□□□ 0.92
ATP7AQ04656 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP7AQ04656 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP7AQ04656 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP7AQ04656 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ATP7AQ04656 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC20.83■□□□□ 0.92
ATP7AQ04656 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP7AQ04656 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP7AQ04656 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP7AQ04656 AC023157.3-201ENST00000619086 2088 ntBASIC20.82■□□□□ 0.92
ATP7AQ04656 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP7AQ04656 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP7AQ04656 FAM226B-201ENST00000602508 1490 ntBASIC20.82■□□□□ 0.92
ATP7AQ04656 PGK1P2-201ENST00000431702 1214 ntBASIC20.82■□□□□ 0.92
ATP7AQ04656 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP7AQ04656 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP7AQ04656 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP7AQ04656 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC20.82■□□□□ 0.92
ATP7AQ04656 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC20.82■□□□□ 0.92
ATP7AQ04656 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP7AQ04656 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ATP7AQ04656 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC20.82■□□□□ 0.92
ATP7AQ04656 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ATP7AQ04656 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP7AQ04656 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP7AQ04656 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP7AQ04656 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP7AQ04656 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP7AQ04656 AL136084.1-201ENST00000449172 318 ntBASIC20.81■□□□□ 0.92
ATP7AQ04656 AC112250.1-201ENST00000504640 745 ntBASIC20.81■□□□□ 0.92
ATP7AQ04656 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP7AQ04656 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC20.81■□□□□ 0.92
ATP7AQ04656 RN7SL121P-201ENST00000584223 273 ntBASIC20.81■□□□□ 0.92
ATP7AQ04656 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ATP7AQ04656 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ATP7AQ04656 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC20.81■□□□□ 0.92
ATP7AQ04656 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP7AQ04656 TUBB8P4-201ENST00000511806 1324 ntBASIC20.8■□□□□ 0.92
ATP7AQ04656 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP7AQ04656 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP7AQ04656 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP7AQ04656 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP7AQ04656 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP7AQ04656 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP7AQ04656 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ATP7AQ04656 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP7AQ04656 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP7AQ04656 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP7AQ04656 MED11-202ENST00000573708 802 ntTSL 2 BASIC20.8■□□□□ 0.92
ATP7AQ04656 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC20.8■□□□□ 0.92
ATP7AQ04656 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ATP7AQ04656 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms