Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
HIST1H1AQ02539 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AL354702.1-201ENST00000442006 1960 ntBASIC11.25□□□□□ -0.61
HIST1H1AQ02539 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 PCDHA5-203ENST00000614258 4248 ntBASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RNU1-114P-201ENST00000365297 166 ntBASIC11.25□□□□□ -0.61
HIST1H1AQ02539 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 DFFBP1-201ENST00000433250 979 ntBASIC11.25□□□□□ -0.61
HIST1H1AQ02539 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AC022616.1-201ENST00000518688 554 ntBASIC11.25□□□□□ -0.61
HIST1H1AQ02539 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 AC099568.2-201ENST00000609194 695 ntBASIC11.25□□□□□ -0.61
HIST1H1AQ02539 MIR8072-201ENST00000614241 80 ntBASIC11.25□□□□□ -0.61
HIST1H1AQ02539 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.25□□□□□ -0.61
HIST1H1AQ02539 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 MEX3B-202ENST00000558133 4333 ntBASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.24□□□□□ -0.61
HIST1H1AQ02539 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms