Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLDN12P56749 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.72□□□□□ -0.37
CLDN12P56749 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.72□□□□□ -0.37
CLDN12P56749 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLDN12P56749 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 AGAP12P-201ENST00000585227 2359 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 NCLP1-201ENST00000445357 1963 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 AC254562.1-201ENST00000417586 456 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.71□□□□□ -0.37
CLDN12P56749 EIF3FP3-201ENST00000434851 1086 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CLDN12P56749 HLA-J-203ENST00000494367 1087 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 AP001582.1-201ENST00000525856 295 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.71□□□□□ -0.37
CLDN12P56749 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 AC004466.1-201ENST00000599515 1080 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 SRD5A3P1-201ENST00000603021 949 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.71□□□□□ -0.37
CLDN12P56749 AL590560.3-201ENST00000623350 461 ntBASIC12.71□□□□□ -0.37
CLDN12P56749 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.71□□□□□ -0.37
CLDN12P56749 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLDN12P56749 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN12P56749 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN12P56749 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN12P56749 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.71□□□□□ -0.38
CLDN12P56749 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN12P56749 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN12P56749 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN12P56749 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CLDN12P56749 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CLDN12P56749 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLDN12P56749 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN12P56749 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.7□□□□□ -0.38
CLDN12P56749 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CLDN12P56749 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN12P56749 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN12P56749 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.7□□□□□ -0.38
CLDN12P56749 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLDN12P56749 TUBB8P4-201ENST00000511806 1324 ntBASIC12.7□□□□□ -0.38
CLDN12P56749 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLDN12P56749 KRT18P13-201ENST00000400056 1290 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms