Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
WNT3AP56704 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
WNT3AP56704 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
WNT3AP56704 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
WNT3AP56704 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
WNT3AP56704 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
WNT3AP56704 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
WNT3AP56704 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
WNT3AP56704 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
WNT3AP56704 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 GOLGA2P4-201ENST00000441462 777 ntBASIC14.69□□□□□ -0.06
WNT3AP56704 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 FAM86HP-204ENST00000513466 959 ntBASIC14.69□□□□□ -0.06
WNT3AP56704 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.69□□□□□ -0.06
WNT3AP56704 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.69□□□□□ -0.06
WNT3AP56704 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 AC005730.2-201ENST00000564549 1184 ntBASIC14.69□□□□□ -0.06
WNT3AP56704 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.69□□□□□ -0.06
WNT3AP56704 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.69□□□□□ -0.06
WNT3AP56704 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 REXO1L6P-201ENST00000603433 1515 ntBASIC14.69□□□□□ -0.06
WNT3AP56704 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
WNT3AP56704 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3AP56704 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
WNT3AP56704 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3AP56704 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 TUBB8P4-201ENST00000511806 1324 ntBASIC14.68□□□□□ -0.06
WNT3AP56704 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 MST1P2-201ENST00000457982 2291 ntBASIC14.68□□□□□ -0.06
WNT3AP56704 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.68□□□□□ -0.06
WNT3AP56704 AL022313.4-201ENST00000562756 2046 ntBASIC14.68□□□□□ -0.06
WNT3AP56704 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
WNT3AP56704 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
WNT3AP56704 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 BTBD6P1-201ENST00000412176 1267 ntBASIC14.68□□□□□ -0.06
WNT3AP56704 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.68□□□□□ -0.06
WNT3AP56704 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 AL096828.3-201ENST00000615354 462 ntBASIC14.68□□□□□ -0.06
WNT3AP56704 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
WNT3AP56704 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.68□□□□□ -0.06
WNT3AP56704 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
WNT3AP56704 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
WNT3AP56704 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
WNT3AP56704 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3AP56704 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
WNT3AP56704 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms