Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CASP6P55212 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 KRT18P9-201ENST00000604826 1300 ntBASIC13.17□□□□□ -0.3
CASP6P55212 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
CASP6P55212 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 AC005252.3-201ENST00000623855 2258 ntBASIC13.17□□□□□ -0.3
CASP6P55212 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 RPL8P2-201ENST00000430538 502 ntBASIC13.17□□□□□ -0.3
CASP6P55212 KLF2P1-201ENST00000447438 1042 ntBASIC13.17□□□□□ -0.3
CASP6P55212 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 RN7SL67P-201ENST00000492147 296 ntBASIC13.17□□□□□ -0.3
CASP6P55212 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.17□□□□□ -0.3
CASP6P55212 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CASP6P55212 Z98259.2-201ENST00000641583 609 ntBASIC13.17□□□□□ -0.3
CASP6P55212 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.17□□□□□ -0.3
CASP6P55212 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.17□□□□□ -0.3
CASP6P55212 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CASP6P55212 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.17□□□□□ -0.3
CASP6P55212 AC003102.2-201ENST00000589195 1469 ntBASIC13.16□□□□□ -0.3
CASP6P55212 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
CASP6P55212 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 AC078991.1-201ENST00000437297 610 ntBASIC13.16□□□□□ -0.3
CASP6P55212 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.16□□□□□ -0.3
CASP6P55212 CICP12-201ENST00000455801 843 ntBASIC13.16□□□□□ -0.3
CASP6P55212 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CASP6P55212 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.16□□□□□ -0.3
CASP6P55212 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.16□□□□□ -0.3
CASP6P55212 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CASP6P55212 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.16□□□□□ -0.3
CASP6P55212 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.16□□□□□ -0.3
CASP6P55212 BX088702.1-201ENST00000610784 235 ntBASIC13.16□□□□□ -0.3
CASP6P55212 AC087392.5-201ENST00000612517 489 ntBASIC13.16□□□□□ -0.3
CASP6P55212 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CASP6P55212 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CASP6P55212 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms