Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.88□□□□□ -0.35
CCR9P51686 GNAQP1-201ENST00000444815 1067 ntBASIC12.88□□□□□ -0.35
CCR9P51686 MYCLP2-201ENST00000449268 967 ntBASIC12.88□□□□□ -0.35
CCR9P51686 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.88□□□□□ -0.35
CCR9P51686 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.88□□□□□ -0.35
CCR9P51686 AL391825.1-201ENST00000457671 1364 ntBASIC12.88□□□□□ -0.35
CCR9P51686 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.88□□□□□ -0.35
CCR9P51686 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.88□□□□□ -0.35
CCR9P51686 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CCR9P51686 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CCR9P51686 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.88□□□□□ -0.35
CCR9P51686 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.88□□□□□ -0.35
CCR9P51686 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CCR9P51686 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.88□□□□□ -0.35
CCR9P51686 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CCR9P51686 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 DFFBP1-201ENST00000433250 979 ntBASIC12.87□□□□□ -0.35
CCR9P51686 METTL21AP1-201ENST00000438852 635 ntBASIC12.87□□□□□ -0.35
CCR9P51686 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.87□□□□□ -0.35
CCR9P51686 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.87□□□□□ -0.35
CCR9P51686 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.87□□□□□ -0.35
CCR9P51686 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.87□□□□□ -0.35
CCR9P51686 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CCR9P51686 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CCR9P51686 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.87□□□□□ -0.35
CCR9P51686 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CCR9P51686 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.87□□□□□ -0.35
CCR9P51686 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CCR9P51686 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CCR9P51686 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCR9P51686 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCR9P51686 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCR9P51686 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.86□□□□□ -0.35
CCR9P51686 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.86□□□□□ -0.35
CCR9P51686 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CCR9P51686 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms