Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 AC105917.1-201ENST00000506637 2539 ntBASIC15.71■□□□□ 0.11
BRCA2P51587 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.71■□□□□ 0.11
BRCA2P51587 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.71■□□□□ 0.11
BRCA2P51587 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
BRCA2P51587 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.71■□□□□ 0.11
BRCA2P51587 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
BRCA2P51587 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.71■□□□□ 0.11
BRCA2P51587 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
BRCA2P51587 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.71■□□□□ 0.1
BRCA2P51587 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.71■□□□□ 0.1
BRCA2P51587 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
BRCA2P51587 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
BRCA2P51587 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC15.71■□□□□ 0.1
BRCA2P51587 AC007679.1-201ENST00000458609 502 ntBASIC15.71■□□□□ 0.1
BRCA2P51587 RN7SL69P-201ENST00000468423 272 ntBASIC15.71■□□□□ 0.1
BRCA2P51587 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC15.71■□□□□ 0.1
BRCA2P51587 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC15.71■□□□□ 0.1
BRCA2P51587 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
BRCA2P51587 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCA2P51587 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.7■□□□□ 0.1
BRCA2P51587 AL359219.1-201ENST00000556311 934 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 GRAMD4P6-201ENST00000556999 244 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 AC005777.1-201ENST00000588332 187 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
BRCA2P51587 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
BRCA2P51587 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BRCA2P51587 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCA2P51587 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BRCA2P51587 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 RPSAP6-201ENST00000417882 882 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 RNA5SP420-201ENST00000516997 137 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 RN7SL524P-201ENST00000581152 300 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
BRCA2P51587 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.7■□□□□ 0.1
BRCA2P51587 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 AP001267.2-201ENST00000532619 2086 ntBASIC15.7■□□□□ 0.1
BRCA2P51587 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
BRCA2P51587 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BRCA2P51587 AL137244.1-201ENST00000422931 865 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 AL359092.2-201ENST00000423330 585 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC15.69■□□□□ 0.1
BRCA2P51587 PRR20FP-201ENST00000603320 180 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 AC011498.7-201ENST00000624986 2027 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.69■□□□□ 0.1
BRCA2P51587 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC15.69■□□□□ 0.1
BRCA2P51587 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC15.69■□□□□ 0.1
BRCA2P51587 AC092573.1-201ENST00000433054 884 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC15.69■□□□□ 0.1
BRCA2P51587 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC15.69■□□□□ 0.1
BRCA2P51587 AL590556.2-202ENST00000636906 844 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 AC015688.4-201ENST00000580780 1647 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCA2P51587 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
BRCA2P51587 Z98885.3-201ENST00000624882 1757 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BRCA2P51587 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms