Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SLC4A9-205ENST00000507527 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 AMPD2-205ENST00000393688 3217 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PCP4P48539 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 SMAD9-202ENST00000379826 5592 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 AC127383.1-201ENST00000444697 1800 ntBASIC9.42□□□□□ -0.9
PCP4P48539 APOL1-201ENST00000319136 3000 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 DNAJB13-205ENST00000543947 1779 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 FCRL1-201ENST00000358292 2778 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 IFIT3-202ENST00000371818 2496 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 MPP2-218ENST00000536246 4351 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 WWP2-201ENST00000356003 4227 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 AC021242.3-201ENST00000607598 1377 ntBASIC9.42□□□□□ -0.9
PCP4P48539 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
PCP4P48539 WNT4-201ENST00000290167 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 MIR149-201ENST00000384879 89 ntBASIC9.42□□□□□ -0.9
PCP4P48539 RPS2P7-201ENST00000447334 885 ntBASIC9.42□□□□□ -0.9
PCP4P48539 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC9.42□□□□□ -0.9
PCP4P48539 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
PCP4P48539 PRKCA-AS1-203ENST00000584715 2113 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC9.42□□□□□ -0.9
PCP4P48539 SPTSSB-204ENST00000617024 1292 ntBASIC9.42□□□□□ -0.9
PCP4P48539 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 AF131215.6-201ENST00000602575 2014 ntBASIC9.42□□□□□ -0.9
PCP4P48539 AC092683.1-204ENST00000610408 2830 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 AC159540.2-202ENST00000613749 2830 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 PAXBP1-AS1-201ENST00000440052 3523 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 SH3TC2-211ENST00000512049 4002 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
PCP4P48539 ZMIZ2-205ENST00000433667 3800 ntTSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 MSNP1-201ENST00000511640 1732 ntBASIC9.42□□□□□ -0.9
PCP4P48539 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 MARCH10-202ENST00000456609 3057 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC9.42□□□□□ -0.9
PCP4P48539 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 FAM106A-201ENST00000392176 2281 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
PCP4P48539 RASGRP4-203ENST00000433821 2941 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PCP4P48539 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
PCP4P48539 CACNB2-202ENST00000324631 3446 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 KRT8P41-201ENST00000533985 1514 ntBASIC9.41□□□□□ -0.9
PCP4P48539 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
PCP4P48539 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 ARL11-201ENST00000282026 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AC007342.6-201ENST00000624289 2594 ntBASIC9.41□□□□□ -0.9
PCP4P48539 PDCD4-202ENST00000393104 3697 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC9.41□□□□□ -0.9
PCP4P48539 POTED-201ENST00000299443 1826 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AIFM1P1-201ENST00000413342 1841 ntBASIC9.41□□□□□ -0.9
PCP4P48539 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC9.41□□□□□ -0.9
PCP4P48539 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
PCP4P48539 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC9.41□□□□□ -0.9
PCP4P48539 RARRES2P10-201ENST00000564312 460 ntBASIC9.41□□□□□ -0.9
PCP4P48539 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC9.41□□□□□ -0.9
PCP4P48539 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC9.41□□□□□ -0.9
PCP4P48539 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC9.41□□□□□ -0.9
PCP4P48539 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 ST6GALNAC5-202ENST00000477717 3751 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms