RNA–Protein interactions for RNA: ENST00000512049.5

SH3TC2-211, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best) BASIC

Gene SH3TC2, Length 4,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-211ENST00000512049 NISCHQ9Y2I1 1504 aa20.48■□□□□ 0.87
SH3TC2-211ENST00000512049 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
SH3TC2-211ENST00000512049 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
SH3TC2-211ENST00000512049 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
SH3TC2-211ENST00000512049 EHMT2Q96KQ7 1210 aa18.79■□□□□ 0.6
SH3TC2-211ENST00000512049 PCGF6Q9BYE7 350 aa18.67■□□□□ 0.58
SH3TC2-211ENST00000512049 FAM9AQ8IZU1 332 aaPredicted RBP18.4■□□□□ 0.54
SH3TC2-211ENST00000512049 TTBK1Q5TCY1 1321 aaPredicted RBP18.16■□□□□ 0.5
SH3TC2-211ENST00000512049 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
SH3TC2-211ENST00000512049 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.49
SH3TC2-211ENST00000512049 PPARGC1BQ86YN6 1023 aaKnown RBP18.07■□□□□ 0.48
SH3TC2-211ENST00000512049 HRCP23327 699 aa18.05■□□□□ 0.48
SH3TC2-211ENST00000512049 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
SH3TC2-211ENST00000512049 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
SH3TC2-211ENST00000512049 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
SH3TC2-211ENST00000512049 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
SH3TC2-211ENST00000512049 ZEB1P37275 1124 aaPredicted RBP17.61■□□□□ 0.41
SH3TC2-211ENST00000512049 APLP2Q06481 763 aa17.49■□□□□ 0.39
SH3TC2-211ENST00000512049 YTHDC1Q96MU7 727 aaKnown RBP17.48■□□□□ 0.39
SH3TC2-211ENST00000512049 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
SH3TC2-211ENST00000512049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
SH3TC2-211ENST00000512049 CENPBP07199 599 aaPredicted RBP17.38■□□□□ 0.37
SH3TC2-211ENST00000512049 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
SH3TC2-211ENST00000512049 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
SH3TC2-211ENST00000512049 PELP1Q8IZL8 1130 aaKnown RBP17.18■□□□□ 0.34
SH3TC2-211ENST00000512049 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
SH3TC2-211ENST00000512049 ATP1B4Q9UN42 357 aaPredicted RBP17.09■□□□□ 0.33
SH3TC2-211ENST00000512049 DIEXFQ68CQ4 756 aaKnown RBP17.08■□□□□ 0.33
SH3TC2-211ENST00000512049 ITGAEP38570 1179 aa17.03■□□□□ 0.32
SH3TC2-211ENST00000512049 GTF3C3Q9Y5Q9 886 aa16.96■□□□□ 0.31
SH3TC2-211ENST00000512049 ABCC9O60706 1549 aa16.96■□□□□ 0.3
SH3TC2-211ENST00000512049 DCAF1Q9Y4B6 1507 aa16.9■□□□□ 0.3
SH3TC2-211ENST00000512049 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
SH3TC2-211ENST00000512049 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
SH3TC2-211ENST00000512049 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
SH3TC2-211ENST00000512049 NEUROD1Q13562 356 aa16.74■□□□□ 0.27
SH3TC2-211ENST00000512049 SCRIBQ14160 1630 aa16.73■□□□□ 0.27
SH3TC2-211ENST00000512049 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
SH3TC2-211ENST00000512049 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
SH3TC2-211ENST00000512049 NEFLP07196 543 aa16.63■□□□□ 0.25
SH3TC2-211ENST00000512049 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
SH3TC2-211ENST00000512049 RSF1Q96T23 1441 aaPredicted RBP16.59■□□□□ 0.25
SH3TC2-211ENST00000512049 BCANQ96GW7 911 aa16.59■□□□□ 0.25
SH3TC2-211ENST00000512049 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
SH3TC2-211ENST00000512049 CCDC180Q9P1Z9 1646 aa16.53■□□□□ 0.24
SH3TC2-211ENST00000512049 FAM50AQ14320 339 aaKnown RBP16.49■□□□□ 0.23
SH3TC2-211ENST00000512049 MYT1Q01538 1121 aa16.48■□□□□ 0.23
SH3TC2-211ENST00000512049 MIER1Q8N108 512 aa16.44■□□□□ 0.22
SH3TC2-211ENST00000512049 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
SH3TC2-211ENST00000512049 P3H3Q8IVL6 736 aa16.39■□□□□ 0.21
SH3TC2-211ENST00000512049 CECR2Q9BXF3 1484 aa16.33■□□□□ 0.21
SH3TC2-211ENST00000512049 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
SH3TC2-211ENST00000512049 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
SH3TC2-211ENST00000512049 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
SH3TC2-211ENST00000512049 DDX10Q13206 875 aaKnown RBP16.21■□□□□ 0.19
SH3TC2-211ENST00000512049 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
SH3TC2-211ENST00000512049 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
SH3TC2-211ENST00000512049 ANP32CO43423 234 aa16.16■□□□□ 0.18
SH3TC2-211ENST00000512049 SOGA1O94964 1423 aa16.16■□□□□ 0.18
SH3TC2-211ENST00000512049 FKBP8Q14318 412 aa16.15■□□□□ 0.18
SH3TC2-211ENST00000512049 CLIP1P30622 1438 aa16.15■□□□□ 0.18
SH3TC2-211ENST00000512049 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
SH3TC2-211ENST00000512049 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.17
SH3TC2-211ENST00000512049 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
SH3TC2-211ENST00000512049 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
SH3TC2-211ENST00000512049 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
SH3TC2-211ENST00000512049 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
SH3TC2-211ENST00000512049 GOLGA3Q08378 1498 aa16■□□□□ 0.15
SH3TC2-211ENST00000512049 IRX6P78412 446 aaPredicted RBP15.99■□□□□ 0.15
SH3TC2-211ENST00000512049 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
SH3TC2-211ENST00000512049 CHIC2Q9UKJ5 165 aa15.94■□□□□ 0.14
SH3TC2-211ENST00000512049 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
SH3TC2-211ENST00000512049 SIN3AQ96ST3 1273 aa15.93■□□□□ 0.14
SH3TC2-211ENST00000512049 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
SH3TC2-211ENST00000512049 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
SH3TC2-211ENST00000512049 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
SH3TC2-211ENST00000512049 EEA1Q15075 1411 aa15.89■□□□□ 0.13
SH3TC2-211ENST00000512049 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
SH3TC2-211ENST00000512049 WIZO95785 1651 aa15.89■□□□□ 0.13
SH3TC2-211ENST00000512049 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
SH3TC2-211ENST00000512049 RUSC2Q8N2Y8 1516 aa15.86■□□□□ 0.13
SH3TC2-211ENST00000512049 NACADO15069 1562 aa15.84■□□□□ 0.13
SH3TC2-211ENST00000512049 BAZ1AQ9NRL2 1556 aaPredicted RBP15.84■□□□□ 0.13
SH3TC2-211ENST00000512049 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.13
SH3TC2-211ENST00000512049 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.12
SH3TC2-211ENST00000512049 FBLN2P98095 1184 aa15.82■□□□□ 0.12
SH3TC2-211ENST00000512049 ZNF777Q9ULD5 760 aaPredicted RBP15.81■□□□□ 0.12
SH3TC2-211ENST00000512049 SALL2Q9Y467 1007 aaPredicted RBP15.79■□□□□ 0.12
SH3TC2-211ENST00000512049 RRP7BPQ9NSQ0 103 aa15.78■□□□□ 0.12
SH3TC2-211ENST00000512049 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.12
SH3TC2-211ENST00000512049 CLSPNQ9HAW4 1339 aa15.77■□□□□ 0.12
SH3TC2-211ENST00000512049 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.11
SH3TC2-211ENST00000512049 KCNH8Q96L42 1107 aa15.77■□□□□ 0.11
SH3TC2-211ENST00000512049 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
SH3TC2-211ENST00000512049 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
SH3TC2-211ENST00000512049 BAZ1BQ9UIG0 1483 aaKnown RBP15.71■□□□□ 0.11
SH3TC2-211ENST00000512049 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
SH3TC2-211ENST00000512049 MRS2Q9HD23 443 aa15.7■□□□□ 0.1
SH3TC2-211ENST00000512049 MTUS2Q5JR59 1369 aa15.7■□□□□ 0.1
SH3TC2-211ENST00000512049 CCNB3Q8WWL7 1395 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms