Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC21.1■□□□□ 0.97
KDM5CP41229 VDAC1P11-201ENST00000458323 852 ntBASIC21.1■□□□□ 0.97
KDM5CP41229 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC21.1■□□□□ 0.97
KDM5CP41229 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC21.1■□□□□ 0.97
KDM5CP41229 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.1■□□□□ 0.97
KDM5CP41229 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC21.1■□□□□ 0.97
KDM5CP41229 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM5CP41229 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
KDM5CP41229 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC21.1■□□□□ 0.97
KDM5CP41229 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC21.1■□□□□ 0.97
KDM5CP41229 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KDM5CP41229 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC21.1■□□□□ 0.97
KDM5CP41229 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM5CP41229 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM5CP41229 KRT8P34-201ENST00000577607 1044 ntBASIC21.1■□□□□ 0.97
KDM5CP41229 MIR4254-201ENST00000581063 76 ntBASIC21.1■□□□□ 0.97
KDM5CP41229 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC21.1■□□□□ 0.97
KDM5CP41229 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KDM5CP41229 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 FGD5P1-202ENST00000614866 2498 ntBASIC21.09■□□□□ 0.97
KDM5CP41229 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
KDM5CP41229 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
KDM5CP41229 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 RPL13AP3-202ENST00000494676 1473 ntBASIC21.09■□□□□ 0.97
KDM5CP41229 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
KDM5CP41229 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KDM5CP41229 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC21.09■□□□□ 0.97
KDM5CP41229 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC21.09■□□□□ 0.97
KDM5CP41229 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KDM5CP41229 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC21.09■□□□□ 0.97
KDM5CP41229 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC21.09■□□□□ 0.97
KDM5CP41229 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC21.09■□□□□ 0.97
KDM5CP41229 RN7SL121P-201ENST00000584223 273 ntBASIC21.09■□□□□ 0.97
KDM5CP41229 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.09■□□□□ 0.97
KDM5CP41229 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.09■□□□□ 0.97
KDM5CP41229 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KDM5CP41229 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
KDM5CP41229 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
KDM5CP41229 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC21.08■□□□□ 0.97
KDM5CP41229 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 RHOC-205ENST00000369636 786 ntTSL 2 BASIC21.08■□□□□ 0.97
KDM5CP41229 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 GGTLC4P-201ENST00000402176 664 ntBASIC21.08■□□□□ 0.97
KDM5CP41229 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC21.08■□□□□ 0.97
KDM5CP41229 COQ10BP2-201ENST00000513804 724 ntBASIC21.08■□□□□ 0.97
KDM5CP41229 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC21.08■□□□□ 0.97
KDM5CP41229 AL512310.5-201ENST00000551999 515 ntBASIC21.08■□□□□ 0.97
KDM5CP41229 FAM187B2P-201ENST00000577135 713 ntBASIC21.08■□□□□ 0.97
KDM5CP41229 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC21.08■□□□□ 0.97
KDM5CP41229 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
KDM5CP41229 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
KDM5CP41229 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KDM5CP41229 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KDM5CP41229 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KDM5CP41229 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC21.08■□□□□ 0.96
KDM5CP41229 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
KDM5CP41229 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC21.08■□□□□ 0.96
KDM5CP41229 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.96
KDM5CP41229 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KDM5CP41229 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDM5CP41229 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC21.07■□□□□ 0.96
KDM5CP41229 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.07■□□□□ 0.96
KDM5CP41229 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KDM5CP41229 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
KDM5CP41229 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM5CP41229 RNA5SP491-201ENST00000362936 118 ntBASIC21.07■□□□□ 0.96
KDM5CP41229 U73169.1-201ENST00000395152 367 ntBASIC21.07■□□□□ 0.96
KDM5CP41229 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
KDM5CP41229 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC21.07■□□□□ 0.96
KDM5CP41229 AC092810.2-201ENST00000431570 362 ntBASIC21.07■□□□□ 0.96
KDM5CP41229 RPSAP12-201ENST00000435879 888 ntBASIC21.07■□□□□ 0.96
KDM5CP41229 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.07■□□□□ 0.96
KDM5CP41229 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC21.07■□□□□ 0.96
KDM5CP41229 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC21.07■□□□□ 0.96
KDM5CP41229 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KDM5CP41229 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
KDM5CP41229 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms