Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 GK-202ENST00000378941 458 ntTSL 3 BASIC16.41■□□□□ 0.22
PRPHP41219 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 BTBD6P1-201ENST00000412176 1267 ntBASIC16.41■□□□□ 0.22
PRPHP41219 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 RPL13AP20-201ENST00000459725 609 ntBASIC16.41■□□□□ 0.22
PRPHP41219 AC006122.1-201ENST00000493323 440 ntBASIC16.41■□□□□ 0.22
PRPHP41219 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 AC003686.1-201ENST00000550956 1034 ntBASIC16.41■□□□□ 0.22
PRPHP41219 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.41■□□□□ 0.22
PRPHP41219 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.41■□□□□ 0.22
PRPHP41219 AC005962.1-201ENST00000584100 773 ntBASIC16.41■□□□□ 0.22
PRPHP41219 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.41■□□□□ 0.22
PRPHP41219 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.41■□□□□ 0.22
PRPHP41219 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.41■□□□□ 0.22
PRPHP41219 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 AL023803.2-201ENST00000620080 638 ntBASIC16.41■□□□□ 0.22
PRPHP41219 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.41■□□□□ 0.22
PRPHP41219 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 AC090643.2-201ENST00000623442 2029 ntBASIC16.41■□□□□ 0.22
PRPHP41219 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 TUBB1P2-201ENST00000422712 1306 ntBASIC16.41■□□□□ 0.22
PRPHP41219 TUBB1P1-201ENST00000503144 1300 ntBASIC16.41■□□□□ 0.22
PRPHP41219 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRPHP41219 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.41■□□□□ 0.22
PRPHP41219 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRPHP41219 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PRPHP41219 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 CYP4F23P-201ENST00000593402 1579 ntBASIC16.4■□□□□ 0.22
PRPHP41219 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 AC005730.2-201ENST00000564549 1184 ntBASIC16.4■□□□□ 0.22
PRPHP41219 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.4■□□□□ 0.22
PRPHP41219 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.4■□□□□ 0.22
PRPHP41219 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 AL096828.3-201ENST00000615354 462 ntBASIC16.4■□□□□ 0.22
PRPHP41219 AC133540.1-201ENST00000620845 1019 ntBASIC16.4■□□□□ 0.22
PRPHP41219 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.4■□□□□ 0.22
PRPHP41219 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 LAP3P2-201ENST00000454686 1454 ntBASIC16.4■□□□□ 0.22
PRPHP41219 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRPHP41219 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRPHP41219 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRPHP41219 KRT8P29-201ENST00000420409 1371 ntBASIC16.39■□□□□ 0.21
PRPHP41219 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.39■□□□□ 0.21
PRPHP41219 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRPHP41219 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms