Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.76□□□□□ -0.37
GDNFP39905 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 SERBP1P5-201ENST00000510079 1181 ntBASIC12.76□□□□□ -0.37
GDNFP39905 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.76□□□□□ -0.37
GDNFP39905 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.76□□□□□ -0.37
GDNFP39905 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
GDNFP39905 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 AC000095.1-201ENST00000603208 874 ntBASIC12.76□□□□□ -0.37
GDNFP39905 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
GDNFP39905 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.76□□□□□ -0.37
GDNFP39905 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.76□□□□□ -0.37
GDNFP39905 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 AL157996.1-201ENST00000624684 2299 ntBASIC12.76□□□□□ -0.37
GDNFP39905 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
GDNFP39905 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GDNFP39905 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.75□□□□□ -0.37
GDNFP39905 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
GDNFP39905 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 BCRP1-201ENST00000444246 691 ntBASIC12.75□□□□□ -0.37
GDNFP39905 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.75□□□□□ -0.37
GDNFP39905 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.75□□□□□ -0.37
GDNFP39905 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 AC004066.1-201ENST00000502488 802 ntBASIC12.75□□□□□ -0.37
GDNFP39905 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 RNA5SP421-201ENST00000516864 134 ntBASIC12.75□□□□□ -0.37
GDNFP39905 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.75□□□□□ -0.37
GDNFP39905 TPRX2P-201ENST00000535362 881 ntBASIC12.75□□□□□ -0.37
GDNFP39905 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
GDNFP39905 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.75□□□□□ -0.37
GDNFP39905 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.75□□□□□ -0.37
GDNFP39905 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.75□□□□□ -0.37
GDNFP39905 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 AL355385.1-201ENST00000606123 409 ntBASIC12.75□□□□□ -0.37
GDNFP39905 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
GDNFP39905 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.75□□□□□ -0.37
GDNFP39905 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GDNFP39905 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
GDNFP39905 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms