Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 AC018665.1-201ENST00000622927 1362 ntBASIC11.94□□□□□ -0.5
DEFA4P12838 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 AC114812.1-204ENST00000449669 728 ntBASIC11.94□□□□□ -0.5
DEFA4P12838 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 SERBP1P5-201ENST00000510079 1181 ntBASIC11.94□□□□□ -0.5
DEFA4P12838 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.94□□□□□ -0.5
DEFA4P12838 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.94□□□□□ -0.5
DEFA4P12838 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.94□□□□□ -0.5
DEFA4P12838 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.94□□□□□ -0.5
DEFA4P12838 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.94□□□□□ -0.5
DEFA4P12838 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 AC008761.3-201ENST00000624803 892 ntBASIC11.94□□□□□ -0.5
DEFA4P12838 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.94□□□□□ -0.5
DEFA4P12838 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
DEFA4P12838 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.94□□□□□ -0.5
DEFA4P12838 MAPK10-262ENST00000641051 5738 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.93□□□□□ -0.5
DEFA4P12838 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
DEFA4P12838 FAM207CP-201ENST00000443486 507 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 SPTLC1P1-201ENST00000447199 261 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 UGT1A2P-201ENST00000454886 866 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 KRT18P25-201ENST00000508931 1278 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 AC022616.1-201ENST00000518688 554 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.93□□□□□ -0.5
DEFA4P12838 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.93□□□□□ -0.5
DEFA4P12838 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.93□□□□□ -0.5
DEFA4P12838 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
DEFA4P12838 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.93□□□□□ -0.5
DEFA4P12838 AC092552.1-201ENST00000547243 906 ntBASIC11.93□□□□□ -0.5
DEFA4P12838 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms