Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.21■□□□□ 0.19
CYP3A4P08684 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.21■□□□□ 0.19
CYP3A4P08684 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.21■□□□□ 0.19
CYP3A4P08684 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.21■□□□□ 0.19
CYP3A4P08684 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.21■□□□□ 0.19
CYP3A4P08684 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.21■□□□□ 0.19
CYP3A4P08684 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CYP3A4P08684 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CYP3A4P08684 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.21■□□□□ 0.19
CYP3A4P08684 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CYP3A4P08684 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.21■□□□□ 0.19
CYP3A4P08684 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.21■□□□□ 0.19
CYP3A4P08684 AC012044.1-201ENST00000603431 297 ntBASIC16.21■□□□□ 0.19
CYP3A4P08684 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.21■□□□□ 0.19
CYP3A4P08684 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CYP3A4P08684 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CYP3A4P08684 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CYP3A4P08684 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CYP3A4P08684 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CYP3A4P08684 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CYP3A4P08684 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
CYP3A4P08684 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CYP3A4P08684 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.21■□□□□ 0.19
CYP3A4P08684 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CYP3A4P08684 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CYP3A4P08684 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CYP3A4P08684 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CYP3A4P08684 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CYP3A4P08684 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.21■□□□□ 0.18
CYP3A4P08684 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.21■□□□□ 0.18
CYP3A4P08684 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.2■□□□□ 0.18
CYP3A4P08684 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CYP3A4P08684 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.2■□□□□ 0.18
CYP3A4P08684 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.2■□□□□ 0.18
CYP3A4P08684 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
CYP3A4P08684 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CYP3A4P08684 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CYP3A4P08684 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 CEP164P1-201ENST00000455142 418 ntBASIC16.2■□□□□ 0.18
CYP3A4P08684 RN7SL67P-201ENST00000492147 296 ntBASIC16.2■□□□□ 0.18
CYP3A4P08684 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.2■□□□□ 0.18
CYP3A4P08684 AC134698.3-201ENST00000523880 214 ntBASIC16.2■□□□□ 0.18
CYP3A4P08684 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.2■□□□□ 0.18
CYP3A4P08684 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.2■□□□□ 0.18
CYP3A4P08684 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CYP3A4P08684 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.2■□□□□ 0.18
CYP3A4P08684 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CYP3A4P08684 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CYP3A4P08684 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CYP3A4P08684 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.2■□□□□ 0.18
CYP3A4P08684 KRT18P9-201ENST00000604826 1300 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 TBC1D3J-201ENST00000620719 1426 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CYP3A4P08684 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CYP3A4P08684 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CYP3A4P08684 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CYP3A4P08684 MIR557-201ENST00000385239 98 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.19■□□□□ 0.18
CYP3A4P08684 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.19■□□□□ 0.18
CYP3A4P08684 DUTP3-201ENST00000450025 415 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 AC234782.1-201ENST00000451950 919 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.19■□□□□ 0.18
CYP3A4P08684 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.19■□□□□ 0.18
CYP3A4P08684 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CYP3A4P08684 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.19■□□□□ 0.18
CYP3A4P08684 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.19■□□□□ 0.18
CYP3A4P08684 MIR3677-201ENST00000578964 60 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 AL133499.1-201ENST00000596207 608 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 AC009560.1-201ENST00000620208 434 ntBASIC16.19■□□□□ 0.18
CYP3A4P08684 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms