Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN1P07384 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN1P07384 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN1P07384 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 CD8B2-202ENST00000417670 633 ntBASIC14.42□□□□□ -0.1
CAPN1P07384 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.42□□□□□ -0.1
CAPN1P07384 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.42□□□□□ -0.1
CAPN1P07384 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.42□□□□□ -0.1
CAPN1P07384 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.42□□□□□ -0.1
CAPN1P07384 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.42□□□□□ -0.1
CAPN1P07384 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.42□□□□□ -0.1
CAPN1P07384 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 AC006453.4-201ENST00000636949 1252 ntBASIC14.42□□□□□ -0.1
CAPN1P07384 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CAPN1P07384 AL359183.1-201ENST00000623796 2132 ntBASIC14.42□□□□□ -0.1
CAPN1P07384 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CAPN1P07384 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CAPN1P07384 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN1P07384 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN1P07384 AHCYP2-201ENST00000430630 1300 ntBASIC14.41□□□□□ -0.1
CAPN1P07384 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CAPN1P07384 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CAPN1P07384 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CAPN1P07384 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
CAPN1P07384 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CAPN1P07384 MYADML-201ENST00000474610 2147 ntBASIC14.41□□□□□ -0.1
CAPN1P07384 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CAPN1P07384 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN1P07384 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CAPN1P07384 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CAPN1P07384 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN1P07384 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.41□□□□□ -0.1
CAPN1P07384 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.41□□□□□ -0.1
CAPN1P07384 FAM86HP-204ENST00000513466 959 ntBASIC14.41□□□□□ -0.1
CAPN1P07384 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.41□□□□□ -0.1
CAPN1P07384 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.41□□□□□ -0.1
CAPN1P07384 RN7SL48P-201ENST00000579283 293 ntBASIC14.41□□□□□ -0.1
CAPN1P07384 MIR6787-201ENST00000616675 61 ntBASIC14.41□□□□□ -0.1
CAPN1P07384 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN1P07384 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.41□□□□□ -0.1
CAPN1P07384 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN1P07384 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.41□□□□□ -0.1
CAPN1P07384 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN1P07384 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CAPN1P07384 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN1P07384 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.4□□□□□ -0.1
CAPN1P07384 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.4□□□□□ -0.1
CAPN1P07384 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.4□□□□□ -0.1
CAPN1P07384 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CAPN1P07384 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms