Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CAPNS1P04632 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPNS1P04632 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPNS1P04632 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPNS1P04632 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPNS1P04632 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CAPNS1P04632 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPNS1P04632 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPNS1P04632 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPNS1P04632 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
CAPNS1P04632 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.52□□□□□ -0.08
CAPNS1P04632 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.08
CAPNS1P04632 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CAPNS1P04632 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CAPNS1P04632 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CAPNS1P04632 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 KRT8P29-201ENST00000420409 1371 ntBASIC14.52□□□□□ -0.08
CAPNS1P04632 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.52□□□□□ -0.08
CAPNS1P04632 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPNS1P04632 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CAPNS1P04632 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.52□□□□□ -0.09
CAPNS1P04632 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AC078991.1-201ENST00000437297 610 ntBASIC14.52□□□□□ -0.09
CAPNS1P04632 AC100850.1-201ENST00000506768 649 ntBASIC14.52□□□□□ -0.09
CAPNS1P04632 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AC242376.1-201ENST00000559033 726 ntBASIC14.52□□□□□ -0.09
CAPNS1P04632 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.52□□□□□ -0.09
CAPNS1P04632 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AP001002.3-201ENST00000623482 206 ntBASIC14.52□□□□□ -0.09
CAPNS1P04632 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPNS1P04632 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPNS1P04632 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPNS1P04632 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPNS1P04632 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 AL591122.2-201ENST00000624125 1853 ntBASIC14.52□□□□□ -0.09
CAPNS1P04632 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AC055811.4-201ENST00000624039 1754 ntBASIC14.52□□□□□ -0.09
CAPNS1P04632 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPNS1P04632 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPNS1P04632 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPNS1P04632 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPNS1P04632 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPNS1P04632 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CAPNS1P04632 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CAPNS1P04632 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPNS1P04632 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPNS1P04632 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPNS1P04632 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
CAPNS1P04632 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPNS1P04632 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPNS1P04632 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CAPNS1P04632 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CAPNS1P04632 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPNS1P04632 RNU1-114P-201ENST00000365297 166 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms