Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USH2AO75445 MKL1-204ENST00000402630 747 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 AKR1C5P-201ENST00000427165 609 ntBASIC6.26□□□□□ -1.41
USH2AO75445 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USH2AO75445 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 RFNG-202ENST00000429557 994 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 TBC1D3P6-201ENST00000505954 962 ntBASIC6.26□□□□□ -1.41
USH2AO75445 MIR2277-201ENST00000515916 93 ntBASIC6.26□□□□□ -1.41
USH2AO75445 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC6.26□□□□□ -1.41
USH2AO75445 Z69706.1-201ENST00000595428 547 ntBASIC6.26□□□□□ -1.41
USH2AO75445 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC6.26□□□□□ -1.41
USH2AO75445 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USH2AO75445 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC6.26□□□□□ -1.41
USH2AO75445 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC6.26□□□□□ -1.41
USH2AO75445 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 RNA5SP491-201ENST00000362936 118 ntBASIC6.25□□□□□ -1.41
USH2AO75445 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 AC007622.1-201ENST00000488371 535 ntBASIC6.25□□□□□ -1.41
USH2AO75445 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC6.25□□□□□ -1.41
USH2AO75445 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC6.25□□□□□ -1.41
USH2AO75445 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC6.25□□□□□ -1.41
USH2AO75445 CARS-216ENST00000639317 135 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC6.25□□□□□ -1.41
USH2AO75445 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
USH2AO75445 U3.5-201ENST00000363448 216 ntBASIC6.25□□□□□ -1.41
USH2AO75445 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 KRT18P42-201ENST00000505048 1255 ntBASIC6.25□□□□□ -1.41
USH2AO75445 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
USH2AO75445 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 AC017100.1-201ENST00000565978 1169 ntBASIC6.25□□□□□ -1.41
USH2AO75445 uc_338.24-201ENST00000617802 182 ntBASIC6.25□□□□□ -1.41
USH2AO75445 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 IMPDH1P5-201ENST00000439688 1540 ntBASIC6.25□□□□□ -1.41
USH2AO75445 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
USH2AO75445 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC6.25□□□□□ -1.41
USH2AO75445 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
USH2AO75445 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms