Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
ZNF253O75346 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
ZNF253O75346 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
ZNF253O75346 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.44□□□□□ -0.58
ZNF253O75346 TSEN15P1-201ENST00000423257 515 ntBASIC11.44□□□□□ -0.58
ZNF253O75346 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.44□□□□□ -0.58
ZNF253O75346 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.44□□□□□ -0.58
ZNF253O75346 AC107373.2-201ENST00000607735 490 ntBASIC11.44□□□□□ -0.58
ZNF253O75346 PRSS30P-206ENST00000641773 873 ntBASIC11.44□□□□□ -0.58
ZNF253O75346 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
ZNF253O75346 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 KRT8P24-201ENST00000560290 1559 ntBASIC11.44□□□□□ -0.58
ZNF253O75346 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
ZNF253O75346 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.44□□□□□ -0.58
ZNF253O75346 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.44□□□□□ -0.58
ZNF253O75346 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
ZNF253O75346 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ZNF253O75346 AC004241.5-201ENST00000623870 2448 ntBASIC11.44□□□□□ -0.58
ZNF253O75346 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ZNF253O75346 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ZNF253O75346 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ZNF253O75346 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.43□□□□□ -0.58
ZNF253O75346 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.43□□□□□ -0.58
ZNF253O75346 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.43□□□□□ -0.58
ZNF253O75346 TLE1P1-201ENST00000422965 589 ntBASIC11.43□□□□□ -0.58
ZNF253O75346 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.43□□□□□ -0.58
ZNF253O75346 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.43□□□□□ -0.58
ZNF253O75346 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 TMEM198B-204ENST00000484016 896 ntBASIC11.43□□□□□ -0.58
ZNF253O75346 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.43□□□□□ -0.58
ZNF253O75346 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 AC109322.1-201ENST00000524499 1264 ntBASIC11.43□□□□□ -0.58
ZNF253O75346 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.43□□□□□ -0.58
ZNF253O75346 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 AC092865.5-201ENST00000545435 363 ntBASIC11.43□□□□□ -0.58
ZNF253O75346 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.43□□□□□ -0.58
ZNF253O75346 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.43□□□□□ -0.58
ZNF253O75346 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 AC092364.2-202ENST00000597012 1073 ntBASIC11.43□□□□□ -0.58
ZNF253O75346 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
ZNF253O75346 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ZNF253O75346 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms