Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC28A1O00337 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC28A1O00337 AC104506.1-201ENST00000609247 429 ntBASIC14.05□□□□□ -0.16
SLC28A1O00337 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.05□□□□□ -0.16
SLC28A1O00337 AC027601.3-201ENST00000622907 509 ntBASIC14.05□□□□□ -0.16
SLC28A1O00337 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC28A1O00337 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SLC28A1O00337 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
SLC28A1O00337 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC28A1O00337 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SLC28A1O00337 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC28A1O00337 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC28A1O00337 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLC28A1O00337 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.04□□□□□ -0.16
SLC28A1O00337 USP17L6P-201ENST00000382470 1197 ntBASIC14.04□□□□□ -0.16
SLC28A1O00337 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC28A1O00337 CD8B2-202ENST00000417670 633 ntBASIC14.04□□□□□ -0.16
SLC28A1O00337 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC28A1O00337 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC28A1O00337 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC28A1O00337 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC28A1O00337 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC28A1O00337 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.04□□□□□ -0.16
SLC28A1O00337 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SLC28A1O00337 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SLC28A1O00337 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC28A1O00337 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 AL157996.1-201ENST00000624684 2299 ntBASIC14.03□□□□□ -0.16
SLC28A1O00337 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLC28A1O00337 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC28A1O00337 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC28A1O00337 CRB3P1-201ENST00000449338 276 ntBASIC14.03□□□□□ -0.16
SLC28A1O00337 AC007389.4-201ENST00000454674 793 ntBASIC14.03□□□□□ -0.16
SLC28A1O00337 CICP12-201ENST00000455801 843 ntBASIC14.03□□□□□ -0.16
SLC28A1O00337 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms