Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 CYP4F23P-201ENST00000593402 1579 ntBASIC12.83□□□□□ -0.36
NPIPB4C9JG80 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 XBP1P1-201ENST00000436573 652 ntBASIC12.83□□□□□ -0.36
NPIPB4C9JG80 KRT223P-202ENST00000449164 1292 ntBASIC12.83□□□□□ -0.36
NPIPB4C9JG80 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 Z93015.1-201ENST00000451718 390 ntBASIC12.83□□□□□ -0.36
NPIPB4C9JG80 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 AC119751.2-201ENST00000504529 210 ntBASIC12.83□□□□□ -0.36
NPIPB4C9JG80 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 AC005962.1-201ENST00000584100 773 ntBASIC12.83□□□□□ -0.36
NPIPB4C9JG80 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.83□□□□□ -0.36
NPIPB4C9JG80 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NPIPB4C9JG80 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 KRT8P29-201ENST00000420409 1371 ntBASIC12.82□□□□□ -0.36
NPIPB4C9JG80 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 MTX1P1-201ENST00000440904 838 ntBASIC12.82□□□□□ -0.36
NPIPB4C9JG80 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 MIR4741-201ENST00000579822 90 ntBASIC12.82□□□□□ -0.36
NPIPB4C9JG80 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 MIR6805-201ENST00000615055 62 ntBASIC12.82□□□□□ -0.36
NPIPB4C9JG80 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NPIPB4C9JG80 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms