Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC087386.2-201ENST00000623212 4637 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AC060814.4-201ENST00000594169 2163 ntBASIC12.7□□□□□ -0.38
SHISA3A0PJX4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SHISA3A0PJX4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 CES1P1-201ENST00000421606 1704 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 TSSK5P-201ENST00000423978 907 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 KRT18P8-201ENST00000581937 1246 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 Z92544.3-201ENST00000624747 417 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 AC024075.2-201ENST00000598112 1473 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 AC100757.3-201ENST00000622361 1406 ntBASIC12.69□□□□□ -0.38
SHISA3A0PJX4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SHISA3A0PJX4 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC104758.3-203ENST00000562938 2123 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC092183.1-201ENST00000469884 875 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC069120.2-201ENST00000524091 540 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC120045.2-201ENST00000567334 178 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 BX088702.1-201ENST00000610784 235 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AL590560.3-201ENST00000623350 461 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 AC134684.3-201ENST00000641758 218 ntBASIC12.68□□□□□ -0.38
SHISA3A0PJX4 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.68□□□□□ -0.38
SHISA3A0PJX4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms