Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 CD8B2-202ENST00000417670 633 ntBASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 FTH1P14-201ENST00000482930 551 ntBASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 ECM1P1-201ENST00000604092 1279 ntBASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.06□□□□□ -0.64
HLA-DRB4X5D2U9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC005562.1-201ENST00000583030 3219 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC011840.2-201ENST00000563063 1520 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AL354702.1-201ENST00000442006 1960 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 RN7SKP230-201ENST00000365642 335 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC004945.1-201ENST00000416738 983 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 GCOM2-201ENST00000509133 1104 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC022447.6-201ENST00000515522 438 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AP000593.2-201ENST00000542775 1433 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 KRT90P-201ENST00000549264 1064 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 AC138951.2-201ENST00000623455 1161 ntBASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.05□□□□□ -0.64
HLA-DRB4X5D2U9 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms