Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AC011700.1-201ENST00000610409 2627 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AL671277.1-201ENST00000429656 993 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 ADH5P3-201ENST00000433842 1137 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SPDYE11-202ENST00000450699 704 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SPDYE9P-201ENST00000570642 692 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AC026120.1-201ENST00000611536 926 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SPDYE10P-202ENST00000612005 668 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SPDYE8P-202ENST00000612377 668 ntBASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRCH1Q9Y2L9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 AL360270.3-201ENST00000609118 1348 ntBASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 AC025181.2-201ENST00000606994 802 ntBASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 AC105339.1-204ENST00000636249 355 ntBASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LRCH1Q9Y2L9 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms