Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 AC138969.2-201ENST00000532739 9932 ntBASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PPARGC1AQ9UBK2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 AC113367.3-201ENST00000508316 1912 ntBASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 AL035414.1-201ENST00000451327 857 ntBASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 Z93015.1-201ENST00000451718 390 ntBASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.24■□□□□ 0.03
PPARGC1AQ9UBK2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AC139712.1-201ENST00000378256 1875 ntBASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 MIR326-201ENST00000362220 95 ntBASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 RPL13AP20-201ENST00000459725 609 ntBASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 FAM86HP-204ENST00000513466 959 ntBASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 DUX4L46-201ENST00000566845 751 ntBASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AC027601.3-201ENST00000622907 509 ntBASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 AL033527.4-201ENST00000641026 673 ntBASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PPARGC1AQ9UBK2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms