Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 AC087499.6-201ENST00000411576 835 ntBASIC13.8□□□□□ -0.2
VAPAQ9P0L0 ARSEP1-201ENST00000420443 635 ntBASIC13.8□□□□□ -0.2
VAPAQ9P0L0 AL161932.2-201ENST00000435436 679 ntBASIC13.8□□□□□ -0.2
VAPAQ9P0L0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 AC027237.1-201ENST00000560942 655 ntBASIC13.8□□□□□ -0.2
VAPAQ9P0L0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 WFDC1-204ENST00000613603 549 ntBASIC13.8□□□□□ -0.2
VAPAQ9P0L0 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VAPAQ9P0L0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AL138709.1-201ENST00000614840 1693 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AC114271.1-201ENST00000612689 2813 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AL591122.2-201ENST00000624125 1853 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AC009486.1-201ENST00000569860 813 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 RN7SL48P-201ENST00000579283 293 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AC104506.1-201ENST00000609247 429 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AC019294.4-201ENST00000561777 2905 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAPAQ9P0L0 AL928654.5-201ENST00000624831 2501 ntBASIC13.79□□□□□ -0.2
VAPAQ9P0L0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.78□□□□□ -0.2
VAPAQ9P0L0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms