Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ZNF169-202ENST00000395395 1986 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 CR769775.4-201ENST00000638516 4139 ntBASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PCDHGA10-202ENST00000612503 4462 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SLC6A12-201ENST00000359674 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 COPS8-201ENST00000354371 4007 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 PLA2G6-201ENST00000332509 3271 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 AC239800.2-201ENST00000443018 2675 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC7.21□□□□□ -1.25
CDC42SE1Q9NRR8 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AC020917.4-201ENST00000623994 1999 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 GOLGA8EP-202ENST00000620011 5241 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 MYO1F-201ENST00000338257 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 WEE1-201ENST00000299613 3436 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AL137127.1-201ENST00000606379 3402 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ICOS-202ENST00000435193 2528 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ASB11-202ENST00000380470 2748 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 STK19B-204ENST00000512515 211 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AC013268.1-206ENST00000638368 961 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AC112229.1-201ENST00000639295 961 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AL365181.1-201ENST00000564032 1828 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 TRIM36-207ENST00000513154 4218 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 RNF6-203ENST00000381588 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 FER1L5-205ENST00000623246 6513 ntTSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 LINC01907-201ENST00000415174 2609 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AL139274.2-201ENST00000606274 4127 ntBASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ELF5-205ENST00000532417 2330 ntTSL 2 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 DNAJB14-205ENST00000442697 6075 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CDC42SE1Q9NRR8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms