Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AL157407.1-201ENST00000435784 904 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 DUTP3-201ENST00000450025 415 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 RN7SL81P-201ENST00000493781 261 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 FAM86KP-201ENST00000509817 987 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AP000845.1-201ENST00000581677 2131 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 MIR3180-2-201ENST00000581748 88 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AC006158.1-201ENST00000610661 249 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AC244250.3-201ENST00000620749 366 ntBASIC16.98■□□□□ 0.31
EFCC1Q9HA90 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
EFCC1Q9HA90 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 AC023090.2-201ENST00000625182 2110 ntBASIC16.97■□□□□ 0.31
EFCC1Q9HA90 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 AC026410.1-201ENST00000507366 1101 ntBASIC16.97■□□□□ 0.31
EFCC1Q9HA90 AC084752.1-201ENST00000509766 622 ntBASIC16.97■□□□□ 0.31
EFCC1Q9HA90 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 AC007326.1-201ENST00000604539 458 ntBASIC16.97■□□□□ 0.31
EFCC1Q9HA90 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 AC027601.3-201ENST00000622907 509 ntBASIC16.97■□□□□ 0.31
EFCC1Q9HA90 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.97■□□□□ 0.31
EFCC1Q9HA90 CICP24-201ENST00000605464 2705 ntBASIC16.97■□□□□ 0.31
EFCC1Q9HA90 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.96■□□□□ 0.31
EFCC1Q9HA90 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
EFCC1Q9HA90 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms