Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RPAP1Q9BWH6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 KRT8P28-201ENST00000433288 1390 ntBASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 RPL17P11-201ENST00000417593 544 ntBASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 AC012617.1-204ENST00000586340 2305 ntBASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 KRT8P21-201ENST00000430398 1491 ntBASIC17.59■□□□□ 0.41
RPAP1Q9BWH6 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.58■□□□□ 0.41
RPAP1Q9BWH6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RPAP1Q9BWH6 RN7SL832P-201ENST00000607781 1756 ntBASIC17.58■□□□□ 0.41
RPAP1Q9BWH6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.58■□□□□ 0.41
RPAP1Q9BWH6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.58■□□□□ 0.41
RPAP1Q9BWH6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 AC239868.1-201ENST00000369385 493 ntBASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 MIR5572-201ENST00000583188 137 ntBASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 MEG3_2.1-201ENST00000611456 105 ntBASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RPAP1Q9BWH6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RPAP1Q9BWH6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RPAP1Q9BWH6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
RPAP1Q9BWH6 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RPAP1Q9BWH6 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.57■□□□□ 0.4
RPAP1Q9BWH6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms