Protein–RNA interactions for Protein: Q96JC9

EAF1, ELL-associated factor 1, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EAF1Q96JC9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
EAF1Q96JC9 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.99□□□□□ -0.49
EAF1Q96JC9 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
EAF1Q96JC9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
EAF1Q96JC9 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
EAF1Q96JC9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
EAF1Q96JC9 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
EAF1Q96JC9 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 CDY3P-201ENST00000454543 1618 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 RN7SKP230-201ENST00000365642 335 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 MIR1202-201ENST00000408529 83 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 MIR1909-201ENST00000411312 80 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AL391280.1-201ENST00000506969 1062 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC079316.1-201ENST00000548397 411 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC106820.3-201ENST00000561653 397 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 OR10B1P-201ENST00000601666 907 ntBASIC11.98□□□□□ -0.49
EAF1Q96JC9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC11.98□□□□□ -0.49
EAF1Q96JC9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
EAF1Q96JC9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 AC020910.5-201ENST00000623668 1865 ntBASIC11.97□□□□□ -0.49
EAF1Q96JC9 INE2-201ENST00000630399 1874 ntBASIC11.97□□□□□ -0.49
EAF1Q96JC9 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 CICP20-201ENST00000443330 2801 ntBASIC11.97□□□□□ -0.49
EAF1Q96JC9 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
EAF1Q96JC9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EAF1Q96JC9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms