Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 TSEN15P1-201ENST00000423257 515 ntBASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 CICP1-201ENST00000416803 2410 ntBASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CHMP6Q96FZ7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 AL133215.2-201ENST00000609242 977 ntBASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.74□□□□□ -0.05
CHMP6Q96FZ7 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.73□□□□□ -0.05
CHMP6Q96FZ7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms