Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 AL157791.1-201ENST00000553667 1699 ntBASIC17.07■□□□□ 0.32
STAG1Q8WVM7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.07■□□□□ 0.32
STAG1Q8WVM7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 AC008132.1-202ENST00000342005 1389 ntBASIC17.06■□□□□ 0.32
STAG1Q8WVM7 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 TSPY25P-201ENST00000429463 745 ntBASIC17.06■□□□□ 0.32
STAG1Q8WVM7 AL596276.2-201ENST00000447525 331 ntBASIC17.06■□□□□ 0.32
STAG1Q8WVM7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 CU633904.3-201ENST00000624042 1029 ntBASIC17.06■□□□□ 0.32
STAG1Q8WVM7 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
STAG1Q8WVM7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 AL133466.1-201ENST00000447582 150 ntBASIC17.05■□□□□ 0.32
STAG1Q8WVM7 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 AC024681.1-201ENST00000521917 487 ntBASIC17.05■□□□□ 0.32
STAG1Q8WVM7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.05■□□□□ 0.32
STAG1Q8WVM7 AC091812.3-201ENST00000621362 345 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms