Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHMP7Q8WUX9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHMP7Q8WUX9 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CHMP7Q8WUX9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHMP7Q8WUX9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
CHMP7Q8WUX9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 RN7SL523P-201ENST00000484401 298 ntBASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 GRAMD4P6-201ENST00000556999 244 ntBASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 AL049840.2-201ENST00000602722 535 ntBASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CHMP7Q8WUX9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 CCL19-202ENST00000378800 414 ntTSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC22.94■■□□□ 1.26
CHMP7Q8WUX9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 MIR339-201ENST00000362153 94 ntBASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 U3.5-201ENST00000363448 216 ntBASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 RN7SKP212-201ENST00000410851 328 ntBASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 VDAC1P11-201ENST00000458323 852 ntBASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC22.93■■□□□ 1.26
CHMP7Q8WUX9 KF455155.1-201ENST00000604493 303 ntBASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms