Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 HNRNPA1P56-201ENST00000505767 954 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 HNRNPA3P12-201ENST00000437410 1063 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 RN7SL33P-201ENST00000462543 342 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 RN7SL340P-201ENST00000470792 296 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 AC010202.1-201ENST00000551181 405 ntBASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.42□□□□□ -0.9
ALMS1Q8TCU4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC064850.1-201ENST00000413279 1398 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 ABCC6P2-201ENST00000526069 590 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AL136298.3-201ENST00000556746 445 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AL121753.2-201ENST00000624581 1461 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC008021.1-201ENST00000474180 414 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 LILRP2-202ENST00000413572 1383 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 PRAL-201ENST00000624952 3286 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 SNU13-204ENST00000402458 462 ntTSL 3 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 OR4C14P-201ENST00000440929 923 ntBASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 SNX20-205ENST00000610485 557 ntTSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC9.41□□□□□ -0.9
ALMS1Q8TCU4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 PAUPAR-201ENST00000630360 2965 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 PPP1R2P10-201ENST00000393023 595 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 CA5BP1-205ENST00000435806 1064 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 KRT18P42-201ENST00000505048 1255 ntBASIC9.4□□□□□ -0.9
ALMS1Q8TCU4 CCNL2P1-201ENST00000512846 969 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms